An expanded phylogeny for the genus Phytophthora.
Identifieur interne : 000A64 ( Main/Exploration ); précédent : 000A63; suivant : 000A65An expanded phylogeny for the genus Phytophthora.
Auteurs : Xiao Yang [États-Unis] ; Brett M. Tyler [États-Unis] ; Chuanxue Hong [États-Unis]Source :
- IMA fungus [ 2210-6340 ] ; 2017.
Abstract
A comprehensive phylogeny representing 142 described and 43 provisionally named Phytophthora species is reported here for this rapidly expanding genus. This phylogeny features signature sequences of 114 ex-types and numerous authentic isolates that were designated as representative isolates by the originators of the respective species. Multiple new subclades were assigned in clades 2, 6, 7, and 9. A single species P. lilii was placed basal to clades 1 to 5, and 7. Phytophthora stricta was placed basal to other clade 8 species, P. asparagi to clade 6 and P. intercalaris to clade 10. On the basis of this phylogeny and ancestral state reconstructions, new hypotheses were proposed for the evolutionary history of sporangial papillation of Phytophthora species. Non-papillate ancestral Phytophthora species were inferred to evolve through separate evolutionary paths to either papillate or semi-papillate species.
DOI: 10.5598/imafungus.2017.08.02.09
PubMed: 29242780
PubMed Central: PMC5729717
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">An expanded phylogeny for the genus <i>Phytophthora</i>.</title><author><name sortKey="Yang, Xiao" sort="Yang, Xiao" uniqKey="Yang X" first="Xiao" last="Yang">Xiao Yang</name><affiliation wicri:level="2"><nlm:affiliation>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA 23455, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA 23455</wicri:regionArea><placeName><region type="state">Virginie</region></placeName></affiliation></author><author><name sortKey="Tyler, Brett M" sort="Tyler, Brett M" uniqKey="Tyler B" first="Brett M" last="Tyler">Brett M. Tyler</name><affiliation wicri:level="2"><nlm:affiliation>Center for Genome Research and Biocomputing, and Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Center for Genome Research and Biocomputing, and Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331</wicri:regionArea><placeName><region type="state">Oregon</region></placeName></affiliation></author><author><name sortKey="Hong, Chuanxue" sort="Hong, Chuanxue" uniqKey="Hong C" first="Chuanxue" last="Hong">Chuanxue Hong</name><affiliation wicri:level="2"><nlm:affiliation>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA 23455, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA 23455</wicri:regionArea><placeName><region type="state">Virginie</region></placeName></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2017">2017</date><idno type="RBID">pubmed:29242780</idno><idno type="pmid">29242780</idno><idno type="doi">10.5598/imafungus.2017.08.02.09</idno><idno type="pmc">PMC5729717</idno><idno type="wicri:Area/Main/Corpus">000862</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000862</idno><idno type="wicri:Area/Main/Curation">000862</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000862</idno><idno type="wicri:Area/Main/Exploration">000862</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">An expanded phylogeny for the genus <i>Phytophthora</i>.</title><author><name sortKey="Yang, Xiao" sort="Yang, Xiao" uniqKey="Yang X" first="Xiao" last="Yang">Xiao Yang</name><affiliation wicri:level="2"><nlm:affiliation>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA 23455, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA 23455</wicri:regionArea><placeName><region type="state">Virginie</region></placeName></affiliation></author><author><name sortKey="Tyler, Brett M" sort="Tyler, Brett M" uniqKey="Tyler B" first="Brett M" last="Tyler">Brett M. Tyler</name><affiliation wicri:level="2"><nlm:affiliation>Center for Genome Research and Biocomputing, and Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Center for Genome Research and Biocomputing, and Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331</wicri:regionArea><placeName><region type="state">Oregon</region></placeName></affiliation></author><author><name sortKey="Hong, Chuanxue" sort="Hong, Chuanxue" uniqKey="Hong C" first="Chuanxue" last="Hong">Chuanxue Hong</name><affiliation wicri:level="2"><nlm:affiliation>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA 23455, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA 23455</wicri:regionArea><placeName><region type="state">Virginie</region></placeName></affiliation></author></analytic><series><title level="j">IMA fungus</title><idno type="ISSN">2210-6340</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">A comprehensive phylogeny representing 142 described and 43 provisionally named <i>Phytophthora</i> species is reported here for this rapidly expanding genus. This phylogeny features signature sequences of 114 ex-types and numerous authentic isolates that were designated as representative isolates by the originators of the respective species. Multiple new subclades were assigned in clades 2, 6, 7, and 9. A single species <i>P. lilii</i> was placed basal to clades 1 to 5, and 7. <i>Phytophthora stricta</i> was placed basal to other clade 8 species, <i>P. asparagi</i> to clade 6 and <i>P. intercalaris</i> to clade 10. On the basis of this phylogeny and ancestral state reconstructions, new hypotheses were proposed for the evolutionary history of sporangial papillation of <i>Phytophthora</i> species. Non-papillate ancestral <i>Phytophthora</i> species were inferred to evolve through separate evolutionary paths to either papillate or semi-papillate species.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">29242780</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>28</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">2210-6340</ISSN><JournalIssue CitedMedium="Print"><Volume>8</Volume><Issue>2</Issue><PubDate><Year>2017</Year><Month>Dec</Month></PubDate></JournalIssue><Title>IMA fungus</Title><ISOAbbreviation>IMA Fungus</ISOAbbreviation></Journal><ArticleTitle>An expanded phylogeny for the genus <i>Phytophthora</i>.</ArticleTitle><Pagination><MedlinePgn>355-384</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.5598/imafungus.2017.08.02.09</ELocationID><Abstract><AbstractText>A comprehensive phylogeny representing 142 described and 43 provisionally named <i>Phytophthora</i> species is reported here for this rapidly expanding genus. This phylogeny features signature sequences of 114 ex-types and numerous authentic isolates that were designated as representative isolates by the originators of the respective species. Multiple new subclades were assigned in clades 2, 6, 7, and 9. A single species <i>P. lilii</i> was placed basal to clades 1 to 5, and 7. <i>Phytophthora stricta</i> was placed basal to other clade 8 species, <i>P. asparagi</i> to clade 6 and <i>P. intercalaris</i> to clade 10. On the basis of this phylogeny and ancestral state reconstructions, new hypotheses were proposed for the evolutionary history of sporangial papillation of <i>Phytophthora</i> species. Non-papillate ancestral <i>Phytophthora</i> species were inferred to evolve through separate evolutionary paths to either papillate or semi-papillate species.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Yang</LastName><ForeName>Xiao</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA 23455, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tyler</LastName><ForeName>Brett M</ForeName><Initials>BM</Initials><AffiliationInfo><Affiliation>Center for Genome Research and Biocomputing, and Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hong</LastName><ForeName>Chuanxue</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Hampton Roads Agricultural Research and Extension Center, Virginia Tech, Virginia Beach, VA 23455, USA.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>11</Month><Day>21</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>IMA Fungus</MedlineTA><NlmUniqueID>101557546</NlmUniqueID><ISSNLinking>2210-6340</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">evolution</Keyword><Keyword MajorTopicYN="N">oomycetes</Keyword><Keyword MajorTopicYN="N">plant pathology</Keyword><Keyword MajorTopicYN="N">systematics</Keyword><Keyword MajorTopicYN="N">taxonomy</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year><Month>06</Month><Day>08</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>10</Month><Day>31</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>12</Month><Day>16</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>12</Month><Day>16</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>12</Month><Day>16</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">29242780</ArticleId><ArticleId IdType="doi">10.5598/imafungus.2017.08.02.09</ArticleId><ArticleId IdType="pmc">PMC5729717</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Mycologia. 2003 Mar-Apr;95(2):269-84</Citation><ArticleIdList><ArticleId IdType="pubmed">21156613</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Biol. 2016 Jun-Jul;120(6-7):836-51</Citation><ArticleIdList><ArticleId IdType="pubmed">27268244</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2014 Jan-Feb;106(1):57-65</Citation><ArticleIdList><ArticleId IdType="pubmed">24396104</ArticleId></ArticleIdList></Reference><Reference><Citation>Persoonia. 2017 Jun;38:100-135</Citation><ArticleIdList><ArticleId IdType="pubmed">29151629</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2012 Sep-Oct;104(5):1133-42</Citation><ArticleIdList><ArticleId IdType="pubmed">22778166</ArticleId></ArticleIdList></Reference><Reference><Citation>Persoonia. 2011 Jun;26:108-56</Citation><ArticleIdList><ArticleId IdType="pubmed">22025808</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2012 Nov-Dec;104(6):1390-6</Citation><ArticleIdList><ArticleId IdType="pubmed">22684290</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycol Res. 2003 Mar;107(Pt 3):277-90</Citation><ArticleIdList><ArticleId IdType="pubmed">12825496</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2006 May-Jun;98(3):410-22</Citation><ArticleIdList><ArticleId IdType="pubmed">17040070</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2006 Sep 1;313(5791):1261-6</Citation><ArticleIdList><ArticleId IdType="pubmed">16946064</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycol Res. 2007 Nov;111(Pt 11):1321-38</Citation><ArticleIdList><ArticleId IdType="pubmed">18032009</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2009 Sep 17;461(7262):393-8</Citation><ArticleIdList><ArticleId IdType="pubmed">19741609</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Genet Biol. 2000 Jun;30(1):17-32</Citation><ArticleIdList><ArticleId IdType="pubmed">10955905</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2010 Jan-Feb;102(1):122-34</Citation><ArticleIdList><ArticleId IdType="pubmed">20120235</ArticleId></ArticleIdList></Reference><Reference><Citation>Syst Biol. 2012 May;61(3):539-42</Citation><ArticleIdList><ArticleId IdType="pubmed">22357727</ArticleId></ArticleIdList></Reference><Reference><Citation>Persoonia. 2015 Jun;34:25-39</Citation><ArticleIdList><ArticleId IdType="pubmed">26240443</ArticleId></ArticleIdList></Reference><Reference><Citation>Persoonia. 2011 Jun;26:13-39</Citation><ArticleIdList><ArticleId IdType="pubmed">22025801</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2012 Apr;102(4):348-64</Citation><ArticleIdList><ArticleId IdType="pubmed">22185336</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2008 Jan-Feb;100(1):99-110</Citation><ArticleIdList><ArticleId IdType="pubmed">18488356</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Phytopathol. 2005;43:309-35</Citation><ArticleIdList><ArticleId IdType="pubmed">16078887</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycol Res. 2008 Jul;112(Pt 7):783-94</Citation><ArticleIdList><ArticleId IdType="pubmed">18501580</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Biol. 2011 Aug;115(8):724-32</Citation><ArticleIdList><ArticleId IdType="pubmed">21802052</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2008 Jul;25(7):1253-6</Citation><ArticleIdList><ArticleId IdType="pubmed">18397919</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2013 Dec;103(12):1204-8</Citation><ArticleIdList><ArticleId IdType="pubmed">23961810</ArticleId></ArticleIdList></Reference><Reference><Citation>Persoonia. 2010 Dec;25:32-49</Citation><ArticleIdList><ArticleId IdType="pubmed">21339965</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Biol. 2014 Jan;118(1):72-82</Citation><ArticleIdList><ArticleId IdType="pubmed">24433678</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol Resour. 2011 Nov;11(6):1002-11</Citation><ArticleIdList><ArticleId IdType="pubmed">21689384</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 1947 Mar-Apr;39(2):218-23</Citation><ArticleIdList><ArticleId IdType="pubmed">20290994</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Genet Biol. 2015 Apr;77:12-21</Citation><ArticleIdList><ArticleId IdType="pubmed">25732380</ArticleId></ArticleIdList></Reference><Reference><Citation>Int J Syst Evol Microbiol. 2016 Feb;66(2):845-855</Citation><ArticleIdList><ArticleId IdType="pubmed">26620125</ArticleId></ArticleIdList></Reference><Reference><Citation>IMA Fungus. 2015 Dec;6(2):319-35</Citation><ArticleIdList><ArticleId IdType="pubmed">26734543</ArticleId></ArticleIdList></Reference><Reference><Citation>Persoonia. 2012 Jun;28:138-82</Citation><ArticleIdList><ArticleId IdType="pubmed">23105159</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycol Res. 2006 Nov;110(Pt 11):1309-22</Citation><ArticleIdList><ArticleId IdType="pubmed">17070028</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycol Res. 2006 Apr;110(Pt 4):393-404</Citation><ArticleIdList><ArticleId IdType="pubmed">16650734</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycol Res. 2007 Mar;111(Pt 3):308-16</Citation><ArticleIdList><ArticleId IdType="pubmed">17368010</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Genet Biol. 2004 Aug;41(8):766-82</Citation><ArticleIdList><ArticleId IdType="pubmed">15219561</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycol Res. 2003 Jul;107(Pt 7):772-89</Citation><ArticleIdList><ArticleId IdType="pubmed">12967204</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycol Res. 2008 Aug;112(Pt 8):906-16</Citation><ArticleIdList><ArticleId IdType="pubmed">18554891</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Biol. 2011 Mar;115(3):275-87</Citation><ArticleIdList><ArticleId IdType="pubmed">21354534</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2014 May 1;30(9):1312-3</Citation><ArticleIdList><ArticleId IdType="pubmed">24451623</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2012 Sep-Oct;104(5):1097-108</Citation><ArticleIdList><ArticleId IdType="pubmed">22492404</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2007 Sep-Oct;99(5):639-43</Citation><ArticleIdList><ArticleId IdType="pubmed">18268898</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycol Res. 2005 Aug;109 (Pt 8):853-9</Citation><ArticleIdList><ArticleId IdType="pubmed">16175787</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycol Res. 2004 Oct;108(Pt 10):1172-84</Citation><ArticleIdList><ArticleId IdType="pubmed">15535068</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Biol. 2016 Aug;120(8):975-987</Citation><ArticleIdList><ArticleId IdType="pubmed">27521629</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2015 Jan-Feb;107(1):54-65</Citation><ArticleIdList><ArticleId IdType="pubmed">25261495</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2014 Jul 29;9(7):e103450</Citation><ArticleIdList><ArticleId IdType="pubmed">25072374</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Genet Biol. 2014 May;66:19-32</Citation><ArticleIdList><ArticleId IdType="pubmed">24603058</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2010 Aug;100(8):732-7</Citation><ArticleIdList><ArticleId IdType="pubmed">20626276</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Lett. 2008 Aug;285(2):203-11</Citation><ArticleIdList><ArticleId IdType="pubmed">18547326</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2017 Feb 16;12 (2):e0172085</Citation><ArticleIdList><ArticleId IdType="pubmed">28208159</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2015 Dec 09;10 (12 ):e0143234</Citation><ArticleIdList><ArticleId IdType="pubmed">26649428</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Genet Biol. 2008 Mar;45(3):266-77</Citation><ArticleIdList><ArticleId IdType="pubmed">18039586</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2009 Jan-Feb;101(1):129-35</Citation><ArticleIdList><ArticleId IdType="pubmed">19271675</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2009 Nov-Dec;101(6):833-40</Citation><ArticleIdList><ArticleId IdType="pubmed">19927748</ArticleId></ArticleIdList></Reference><Reference><Citation>Persoonia. 2013 Dec;31:63-76</Citation><ArticleIdList><ArticleId IdType="pubmed">24761035</ArticleId></ArticleIdList></Reference><Reference><Citation>Persoonia. 2009 Jun;22:1-13</Citation><ArticleIdList><ArticleId IdType="pubmed">20198133</ArticleId></ArticleIdList></Reference><Reference><Citation>Persoonia. 2009 Jun;22:95-110</Citation><ArticleIdList><ArticleId IdType="pubmed">20198142</ArticleId></ArticleIdList></Reference><Reference><Citation>Persoonia. 2015 Dec;35:264-327</Citation><ArticleIdList><ArticleId IdType="pubmed">26823636</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycol Res. 2003 Apr;107(Pt 4):477-84</Citation><ArticleIdList><ArticleId IdType="pubmed">12825521</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Lett. 2014 Mar;352(2):230-7</Citation><ArticleIdList><ArticleId IdType="pubmed">24484074</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Plant Microbe Interact. 2016 Jul;29(7):573-83</Citation><ArticleIdList><ArticleId IdType="pubmed">27183038</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycol Res. 2008 Oct;112(Pt 10):1195-205</Citation><ArticleIdList><ArticleId IdType="pubmed">18693002</ArticleId></ArticleIdList></Reference><Reference><Citation>FEMS Microbiol Lett. 2006 Aug;261(2):165-74</Citation><ArticleIdList><ArticleId IdType="pubmed">16907716</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2007 Mar-Apr;99(2):222-6</Citation><ArticleIdList><ArticleId IdType="pubmed">17682774</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2011 Mar-Apr;103(2):341-50</Citation><ArticleIdList><ArticleId IdType="pubmed">21193600</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2009 Mar-Apr;101(2):220-31</Citation><ArticleIdList><ArticleId IdType="pubmed">19397195</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2011 Mar-Apr;103(2):351-60</Citation><ArticleIdList><ArticleId IdType="pubmed">21415291</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2014 May-Jun;106(3):431-47</Citation><ArticleIdList><ArticleId IdType="pubmed">24871599</ArticleId></ArticleIdList></Reference><Reference><Citation>Int J Syst Evol Microbiol. 2017 Sep;67(9):3666-3675</Citation><ArticleIdList><ArticleId IdType="pubmed">28857022</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2007 Nov 1;23(21):2947-8</Citation><ArticleIdList><ArticleId IdType="pubmed">17846036</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>États-Unis</li></country><region><li>Oregon</li><li>Virginie</li></region></list><tree><country name="États-Unis"><region name="Virginie"><name sortKey="Yang, Xiao" sort="Yang, Xiao" uniqKey="Yang X" first="Xiao" last="Yang">Xiao Yang</name></region><name sortKey="Hong, Chuanxue" sort="Hong, Chuanxue" uniqKey="Hong C" first="Chuanxue" last="Hong">Chuanxue Hong</name><name sortKey="Tyler, Brett M" sort="Tyler, Brett M" uniqKey="Tyler B" first="Brett M" last="Tyler">Brett M. Tyler</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PhytophthoraV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000A64 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000A64 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= PhytophthoraV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:29242780
|texte= An expanded phylogeny for the genus Phytophthora.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:29242780" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PhytophthoraV1
| This area was generated with Dilib version V0.6.38. |  |